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  • Yue Zhao
  • pyod
  • Issues
  • #23
Closed
Open
Issue created Oct 14, 2018 by Administrator@rootContributor

KNN Mahalanobis distance error

Created by: hanshupe

Hi,

When I use the Mahalanobis metric for KNN I always get the error "Must provide either V or VI for Mahalanobis distance" even when I provide V with metric_params. The same request works with sklearn.neighbors.


from pyod.models.knn import KNN  
from pyod.utils.data import generate_data
from sklearn.neighbors import NearestNeighbors
import numpy as np

contamination = 0.1  
n_train = 200  
n_test = 100 

X_train, y_train, X_test, y_test = generate_data(n_train=n_train, n_test=n_test, contamination=contamination)

#Doesn't work (Must provide either V or VI for Mahalanobis distance)
clf = KNN(algorithm='brute', metric='mahalanobis', metric_params={'V': np.cov(X_train)})
clf.fit(X_train)

#Works
nn = NearestNeighbors(algorithm='brute', metric='mahalanobis', metric_params={'V': np.cov(X_train)})
nn.fit(X_train)
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